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5. Bruker TruLive3D emission filters and fluorophores spectrum

This page will help you figure out which filter combination you need for most commonly used fluorophores on the Bruker TruLive3D.

The Bruker TruLive3D light sheet microscope has two imaging cameras with two motorized filter wheels and two sets of filters. It is designed to split different emission wavelengths between the two cameras for simultaneous imaging with two different emission channels.

The "Long Camera" will record the fluorescence emitting at the longest wavelength and the "Short Camera" will record the fluorescence emitting at the shortest wavelength.

When you set up your experiment you want to make sure that you select the best filter option for each camera so that the fluorescence from one fluorophore does not mix up with the other.

The Bruker TruLive3D has the following emission filters options:

Filter wheel Short Camera: BP418-462    LP498    BP497-554    BP580-627   BP610-651

Filter wheel Long Camera:                         LP498    BP497-554    BP580-627    BP610-651    BP655-704

To select the appropriate filters you need to know the emission peak wavelength of the fluorophores you are using.

Below is a list of the most commonly used fluorophores and a screenshot of their excitation/emission spectrums from fpbase.org   or aatbio.com . When you click on the link you can use the interactive spectrum viewer.

If your fluorophores are not on this page please let us know and we will update this page for you!

GFP : https://www.fpbase.org/protein/superfolder-gfp/

GFP-Ex-Em spectrum.png

mCherry : https://www.fpbase.org/protein/mcherry/ 

mCherry-Ex-Em Spectrum.png

DAPI : https://www.aatbio.com/fluorescence-excitation-emission-spectrum-graph-viewer/dapi_4_6_diamidino_2_phenylindole

DAPI-Ex-Em Spectrum.png

TRITC : https://www.aatbio.com/fluorescence-excitation-emission-spectrum-graph-viewer/tritc_tetramethylrhodamine_isothiocyanate

TRITC-Ex-Em Spectrum.png

AlexaFluor488 : https://www.aatbio.com/fluorescence-excitation-emission-spectrum-graph-viewer/alexa_fluor_488

AlexaFluor488-Ex-Em Spectrum.png

AlexaFluor555 : https://www.aatbio.com/fluorescence-excitation-emission-spectrum-graph-viewer/xfd555_alexa_fluor_555_equivalent

AlexaFluor555.png

AlexaFluor594 : https://www.aatbio.com/fluorescence-excitation-emission-spectrum-graph-viewer/xfd594_alexa_fluor_594_equivalent

AlexaFluor594-Ex-Em Spectrum.png

AlexaFluor647 : https://www.aatbio.com/fluorescence-excitation-emission-spectrum-graph-viewer/xfd647_alexa_fluor_647_equivalent

AlexaFluor647-Ex-Em-Spectrum.png